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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12493321_12494871_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

3UTR

Intron Coordinates:

12493321 - 12494871

Intron Length:

1551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGGCTGGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTTTCTTCAAAA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

78.2

0.7

79.9

32.6

Major PPT

49.9

-0

1.2

51.3

42.1

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

69.2

0.6

1.6

81.08

34.1

Associated Gene:

Gene:

CSNK1D

Ensembl Gene ID:

ENSAPLG00000004969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005141

12493269 - 12511478

18210