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Intron Name: Anas_platyrhynchos_platyrhynchos_19_1678512_1682823_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1678512 - 1682823

Intron Length:

4312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

GCCTTGCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

TTACCATTAAAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

38.2

Major BPS

70.2

0.5

71.6

30.1

Major PPT

64.4

0.32

37.4

Minor 5ss

27.4

-2.6

3.5

36.8

47.7

Minor BPS

60.8

0.32

1.7

72.09

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018403

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034085

1676929 - 1685934

9006