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Intron Name: Anas_platyrhynchos_platyrhynchos_19_1709909_1711223_R


Intron Information:

Intron Rank:
34

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1709909 - 1711223

Intron Length:
1315

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGATTG

5'SS Class:
strong_major

3'SS Sequence:
GAAACCTTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATATAAC

U12 Branch Point Sequence:
CCTTCCTGAAAC

Flanking Amino Acid:
LEAEILQLQEEFAASERARR

Intron Amino Acid Position:
1695

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.5
0.88
0.8
77.6
33.4

Major BPS
69.1
0.48
1
70
32.1

Major PPT
66.9
0.38
1
58.4
42.4

Minor 5ss
36.1
-1.6
3.2
46.6
48.7

Minor BPS
62.4
0.37
1.6
68.51
42.7

Associated Gene:

Gene:
MYH10

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1704714 - 1806604
101891

1704714 - 1806604
101891

1708325 - 1806571
98247