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Intron Name: Anas_platyrhynchos_platyrhynchos_19_1728148_1728760_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1728148 - 1728760

Intron Length:
613

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTATGTGTG

5'SS Class:
major

3'SS Sequence:
TTTCTGTCTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTTAA

U12 Branch Point Sequence:
CTGTTCTTAACA

Flanking Amino Acid:
QAVCRGYLARKAFAKKQQQL

Intron Amino Acid Position:
804

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.6
0.65
1
71.6
38.4

Major BPS
82.2
0.8
0.8
71.9
35.8

Major PPT
87
0.83
0.7
84.9
29.9

Minor 5ss
44.1
-0.6
3.1
57.5
41.6

Minor BPS
77.8
0.87
1.2
78.47
38.6

Associated Gene:

Gene:
MYH10

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1704714 - 1806604
101891

1704714 - 1806604
101891

1708325 - 1806571
98247