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Intron Name: Anas_platyrhynchos_platyrhynchos_19_1729540_1729931_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1729540 - 1729931

Intron Length:
392

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTATGTGCT

5'SS Class:
major

3'SS Sequence:
TTTGTTTGTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTAAA

U12 Branch Point Sequence:
AAAAATTTAAAA

Flanking Amino Acid:
RCIIPNHEKRAGKLDPHLVL

Intron Amino Acid Position:
687

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.8
0.68
1
71.5
38.6

Major BPS
81.6
0.78
0.8
82
24.9

Major PPT
83.5
0.75
0.9
76.9
42.1

Minor 5ss
41
-1
3.1
50.4
46

Minor BPS
48.6
-0.1
1.6
55.52
36.1

Associated Gene:

Gene:
MYH10

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1704714 - 1806604
101891

1704714 - 1806604
101891

1708325 - 1806571
98247