Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_1733785_1735991_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1733785 - 1735991

Intron Length:

2207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

GTCTGCTCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

TCTGCTCTAAAG

Flanking Amino Acid:

DFCIIHYAGKVDYKADEWLM

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.5

1.02

0.7

25.3

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

64.7

0.33

1.1

63.3

37.5

Minor 5ss

36.4

-1.5

3.6

55.7

48.5

Minor BPS

48.3

-0.2

1.9

56.82

44.8

Associated Gene:

Gene:

MYH10

Ensembl Gene ID:

ENSAPLG00000015386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016287

1708325 - 1806571

98247

ENSAPLT00000038064

1704714 - 1806604

101891

ENSAPLT00000034869

1704714 - 1806604

101891