Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_1743459_1744407_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1743459 - 1744407

Intron Length:

949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

CCCCCAAATACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

TTTCCCCCAAAT

Flanking Amino Acid:

LLAGAGEHLKSDLLLEGFNN

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

73.2

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

0.27

0.9

54.1

33.2

Minor 5ss

41.5

-0.9

2.8

49.9

46.4

Minor BPS

53.9

0.2

80.66

40.1

Associated Gene:

Gene:

MYH10

Ensembl Gene ID:

ENSAPLG00000015386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038064

1704714 - 1806604

101891

ENSAPLT00000034869

1704714 - 1806604

101891

ENSAPLT00000016287

1708325 - 1806571

98247