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Intron Name: Anas_platyrhynchos_platyrhynchos_19_1860889_1861011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1860889 - 1861011

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CTGGCCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGCCAT

U12 Branch Point Sequence:

GGCACAGGAGCC

Flanking Amino Acid:

MQKTLEEKEEAFRERMKAIA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

44.7

-0.3

1.5

50.2

45.2

Major PPT

62.5

0.28

1.1

54.2

41.4

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

33.7

-1.2

2.1

39.14

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016532

1860373 - 1865255

4883