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Intron Name: Anas_platyrhynchos_platyrhynchos_19_1876065_1879409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1876065 - 1879409

Intron Length:

3345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

GTTGTGTGAAAT

Flanking Amino Acid:

KELQKLIALPETEKSNEEKQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

82.5

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

75.3

0.57

0.9

68.7

37.2

Minor 5ss

36.7

-1.5

3.5

55.8

48.4

Minor BPS

44.8

-0.3

2.2

66.37

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016618

1874439 - 1879987

5549