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Intron Name: Anas_platyrhynchos_platyrhynchos_19_1894721_1895750_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1894721 - 1895750

Intron Length:
1030

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCA|GTAAGTGGC

5'SS Class:
major

3'SS Sequence:
TTTCTCAATCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTCAA

U12 Branch Point Sequence:
CCTTTCTCAATC

Flanking Amino Acid:
INNLSGRSFSAVANRLKTRD

Intron Amino Acid Position:
666

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.8
0.58
1.1
64.6
40.3

Major BPS
85.7
0.89
0.8
85.9
22.5

Major PPT
78.9
0.65
0.9
71.2
38.6

Minor 5ss
35.2
-1.7
3.3
49.2
41.2

Minor BPS
60.3
0.3
1.6
65.51
41

Associated Gene:

Gene:
PIK3R6

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1892773 - 1917209
24437

1892773 - 1920401
27629