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Intron Name: Anas_platyrhynchos_platyrhynchos_19_1901769_1902020_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1901769 - 1902020

Intron Length:
252

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCT|GTGAGTGGG

5'SS Class:
major

3'SS Sequence:
CTTCTGCCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTGAG

U12 Branch Point Sequence:
CCTCCCTGAGCT

Flanking Amino Acid:
FHLWKEDDQLWKELVLFIRP

Intron Amino Acid Position:
294

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.7
0.42
1.1
56.5
42.7

Major BPS
47
-0.1
1.5
42.6
40.4

Major PPT
75.1
0.56
0.8
68.5
32

Minor 5ss
29.6
-2.3
3.2
41
45.3

Minor BPS
53.4
0.19
1.8
70.42
46

Associated Gene:

Gene:
PIK3R6

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1892773 - 1917209
24437

1892773 - 1920401
27629