Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_1902108_1903049_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1902108 - 1903049

Intron Length:

942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTTAC

U12 Branch Point Sequence:

TGTGTGTTACGA

Flanking Amino Acid:

YCALLGSLPPGDAPLGRLQD

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

68.6

36.5

Major BPS

53.7

0.09

1.4

49.1

Major PPT

88.1

0.86

0.6

81.6

30.5

Minor 5ss

27.8

-2.5

2.9

34.2

41.4

Minor BPS

40.8

-0.7

2.4

54.59

44.6

Associated Gene:

Gene:

PIK3R6

Ensembl Gene ID:

ENSAPLG00000015945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036245

1892773 - 1917209

24437

ENSAPLT00000016655

1892773 - 1920401

27629