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Intron Name: Anas_platyrhynchos_platyrhynchos_19_1905209_1905452_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1905209 - 1905452

Intron Length:
244

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACTGCT

5'SS Class:
strong_major

3'SS Sequence:
TTTCTTGCTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCCTTAC

U12 Branch Point Sequence:
ATCTCCTTACCT

Flanking Amino Acid:
LHTLMYTLIKAPCISDELCS

Intron Amino Acid Position:
87

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.9
0.78
1.1
78.8
35.5

Major BPS
68.9
0.47
1
59.6
38.6

Major PPT
85.6
0.8
0.8
80.9
31.1

Minor 5ss
40.9
-1
3.2
59.5
45

Minor BPS
73.9
0.83
1.6
86.17
40

Associated Gene:

Gene:
PIK3R6

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1892773 - 1917209
24437

1892773 - 1920401
27629