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Intron Name: Anas_platyrhynchos_platyrhynchos_19_1941413_1941717_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1941413 - 1941717

Intron Length:
305

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACGTGCG

5'SS Class:
strong_major

3'SS Sequence:
CCCCTCACCACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTGAC

U12 Branch Point Sequence:
TCGCCCCTCACC

Flanking Amino Acid:
MNLPMDVLCQSAKPEAEPQG

Intron Amino Acid Position:
600

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.4
0.81
1
69.9
40.9

Major BPS
71.3
0.53
1.2
63.1
44.5

Major PPT
67.8
0.4
0.8
60.7
27.7

Minor 5ss
31.9
-2.1
3.3
41.4
45.1

Minor BPS
47.9
-0.1
2.1
60.47
44.7

Associated Gene:

Gene:
PIK3R5

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1935228 - 1977437
42210

1935524 - 1951510
15987