Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_1949223_1949945_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1949223 - 1949945

Intron Length:

723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

CCTGTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CCTTCCTCACCA

Flanking Amino Acid:

ALLFYYAVLCAPYIPPGSEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

65.7

45.7

Major BPS

72.4

0.56

73.5

32.5

Major PPT

71.9

0.49

0.8

64.7

Minor 5ss

39.8

-1.1

51.2

45.1

Minor BPS

55.9

0.18

1.9

67.11

45.4

Associated Gene:

Gene:

PIK3R5

Ensembl Gene ID:

ENSAPLG00000016065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036385

1935228 - 1977437

42210