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Intron Name: Anas_platyrhynchos_platyrhynchos_19_2079117_2085667_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2079117 - 2085667

Intron Length:

6551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTAACAT

U12 Branch Point Sequence:

TTTTCCTCTCTC

Flanking Amino Acid:

NMKKYCKKDYAVQIHILKAE

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.6

37.9

Major BPS

53.2

0.08

1.3

63.4

42.8

Major PPT

95.2

1.02

0.5

28.1

Minor 5ss

35.6

-1.6

2.9

44.4

43.5

Minor BPS

41.6

-0.6

3.7

70.76

Associated Gene:

Gene:

NTN1

Ensembl Gene ID:

ENSAPLG00000009859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031625

2004601 - 2085996

81396

ENSAPLT00000010264

2004601 - 2086996

82396