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Intron Name: Anas_platyrhynchos_platyrhynchos_19_208212_211547_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

208212 - 211547

Intron Length:

3336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGGTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

CATTGTTGCACT

Flanking Amino Acid:

SQNSLAAQEEGTLGEAWAQL

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

78.8

38.3

Major BPS

0.57

1.2

41.2

Major PPT

86.4

0.82

0.8

84.6

Minor 5ss

43.4

-0.7

2.8

46.2

Minor BPS

44.8

-0.3

2.3

65.35

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003204

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003294

191730 - 224740

33011