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Intron Name: Anas_platyrhynchos_platyrhynchos_19_2190342_2191911_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2190342 - 2191911

Intron Length:

1570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATAAAA

U12 Branch Point Sequence:

TGTCGGATAAAA

Flanking Amino Acid:

GDGDGTSTTQGMLGSSPVTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

38.7

Major BPS

-0

1.2

57.3

36.3

Major PPT

78.7

0.65

0.8

72.6

32.3

Minor 5ss

25.2

-2.9

3.2

43.6

Minor BPS

39.5

-0.8

2.5

56.1

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009800

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010205

2190230 - 2195465

5236