Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_2193305_2193835_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2193305 - 2193835

Intron Length:

531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGACG

5'SS Class:

strong_major

3'SS Sequence:

GTGTGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

CTGACCACACCA

Flanking Amino Acid:

STSEDGCSLQRFYSCCEGYE

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

72.1

39.1

Major BPS

63.7

0.34

1.2

41.8

Major PPT

65.5

0.35

41.4

Minor 5ss

27.1

-2.6

2.9

31.3

42.6

Minor BPS

42.5

-0.5

53.22

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009800

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010205

2190230 - 2195465

5236