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Intron Name: Anas_platyrhynchos_platyrhynchos_19_2213745_2214442_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2213745 - 2214442

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAGAT

U12 Branch Point Sequence:

TTTCTCTTGACA

Flanking Amino Acid:

LCKGSNYKAMKRIQVQGGVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.7

33.3

Major BPS

62.6

0.31

58.7

38.1

Major PPT

82.7

0.74

0.9

79.9

32.1

Minor 5ss

40.1

-1.1

2.9

49.5

41.1

Minor BPS

77.4

0.86

1.1

83.73

29.3

Associated Gene:

Gene:

CFAP52

Ensembl Gene ID:

ENSAPLG00000009477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030910

2205466 - 2222063

16598

ENSAPLT00000009879

2213273 - 2222063

8791