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Intron Name: Anas_platyrhynchos_platyrhynchos_19_2217480_2219863_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2217480 - 2219863

Intron Length:

2384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTGATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAA

U12 Branch Point Sequence:

TGCTGCTGATTT

Flanking Amino Acid:

RIVSGGGEGQVRVWAIGEKT

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

83.5

28.8

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

77.3

0.61

0.9

73.4

Minor 5ss

43.9

-0.7

3.1

65.3

45.8

Minor BPS

46.3

-0.2

2.1

65.23

45.5

Associated Gene:

Gene:

CFAP52

Ensembl Gene ID:

ENSAPLG00000009477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030910

2205466 - 2222063

16598

ENSAPLT00000009879

2213273 - 2222063

8791