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Intron Name: Anas_platyrhynchos_platyrhynchos_19_2220016_2220635_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2220016 - 2220635

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGGAGA

5'SS Class:

major

3'SS Sequence:

GGGTGTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTGACCTTATTG

Flanking Amino Acid:

LDGTCIIWDIVRSVRKQMIL

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.2

62.6

43.5

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

72.6

0.51

65.2

45.5

Minor 5ss

33.6

-1.9

3.2

40.4

45.5

Minor BPS

59.1

0.15

1.7

63.91

44.3

Associated Gene:

Gene:

CFAP52

Ensembl Gene ID:

ENSAPLG00000009477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030910

2205466 - 2222063

16598

ENSAPLT00000009879

2213273 - 2222063

8791