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Intron Name: Anas_platyrhynchos_platyrhynchos_19_2220739_2220987_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2220739 - 2220987

Intron Length:

249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

ATCTGCTCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

CATCTCTGATCT

Flanking Amino Acid:

QLITSGTDRRIAYWEVFDGS

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

74.1

38.3

Major BPS

88.7

0.96

0.8

36.5

Major PPT

71.8

0.49

0.9

62.8

39.1

Minor 5ss

38.3

-1.3

2.8

40.3

45.6

Minor BPS

49.3

0.03

1.7

67.26

43.1

Associated Gene:

Gene:

CFAP52

Ensembl Gene ID:

ENSAPLG00000009477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030910

2205466 - 2222063

16598

ENSAPLT00000009879

2213273 - 2222063

8791