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Intron Name: Anas_platyrhynchos_platyrhynchos_19_2221100_2221887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2221100 - 2221887

Intron Length:

788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTGCCCGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

CTCTGTGTAATC

Flanking Amino Acid:

ITSDGAYFVTGGDDHLVKMW

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

66.2

0.36

58.2

38.4

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

-0.4

2.3

56.67

43.4

Associated Gene:

Gene:

CFAP52

Ensembl Gene ID:

ENSAPLG00000009477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030910

2205466 - 2222063

16598

ENSAPLT00000009879

2213273 - 2222063

8791