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Intron Name: Anas_platyrhynchos_platyrhynchos_19_2250739_2253670_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2250739 - 2253670

Intron Length:

2932

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTT|GCAATCAGT

5'SS Class:

weak_major

3'SS Sequence:

TTGTTCAGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAG

U12 Branch Point Sequence:

GTTTGTTCAGCC

Flanking Amino Acid:

VAGNRLVTKLSRAGRGEASW

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.2

0.01

1.4

59.6

44.6

Major BPS

60.8

0.27

1.6

71.4

45.1

Major PPT

70.1

0.45

62.8

Minor 5ss

33.4

-1.9

4.1

54.7

43.7

Minor BPS

46.8

-0.2

2.1

63.25

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008149

2244394 - 2254012

9619