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Intron Name: Anas_platyrhynchos_platyrhynchos_19_2383089_2383606_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2383089 - 2383606

Intron Length:
518

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGCGCT

5'SS Class:
strong_major

3'SS Sequence:
ATGTCCCCAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGGCAT

U12 Branch Point Sequence:
ATGTCCCCAACA

Flanking Amino Acid:
ALAETEAPLQVAQECLLHRE

Intron Amino Acid Position:
194

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.4
0.84
0.9
74.9
35.3

Major BPS
59.9
0.25
1.5
71.4
45.1

Major PPT
66.1
0.36
1
59.9
36.2

Minor 5ss
33.5
-1.9
3.4
47.6
48

Minor BPS
57
0.22
1.9
71.25
40.5

Associated Gene:

Gene:
TEKT3

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2382481 - 2389024
6544