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Intron Name: Anas_platyrhynchos_platyrhynchos_19_2406604_2409771_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2406604 - 2409771

Intron Length:

3168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TGCTGCTCACCG

Flanking Amino Acid:

YITGIFQILAGLCVMSGAAI

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

67.4

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

78.3

0.64

0.7

73.1

25.2

Minor 5ss

32.6

-2

3.2

45.3

Minor BPS

44.3

-0.5

2.2

51.98

48.1

Associated Gene:

Gene:

PMP22

Ensembl Gene ID:

ENSAPLG00000023975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045442

2396071 - 2410086

14016