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Intron Name: Anas_platyrhynchos_platyrhynchos_19_2468991_2472432_F

Intron Information:

Intron Rank:

133232

Intron Class:

major

Intron Phase:

Intron Coordinates:

2468991 - 2472432

Intron Length:

3442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGCAG

5'SS Class:

major

3'SS Sequence:

TTGTTGTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCCTAC

U12 Branch Point Sequence:

CTGCCCCTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

62.4

43.6

Major BPS

43.7

-0.4

1.2

35.7

31.8

Major PPT

82.4

0.73

0.8

81.2

36.5

Minor 5ss

30.2

-2.3

3.2

38.2

46.7

Minor BPS

47.6

-0.1

65.71

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027169

2444207 - 2472926

28720