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Intron Name: Anas_platyrhynchos_platyrhynchos_19_25714_26672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

25714 - 26672

Intron Length:

959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTC

5'SS Class:

strong_major

3'SS Sequence:

GAATAAATTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

CCTTACTGAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

35.3

Major BPS

65.7

0.39

71.3

30.3

Major PPT

61.9

0.27

1.1

52.6

45.3

Minor 5ss

36.5

-1.5

3.2

50.8

45.8

Minor BPS

56.4

0.2

1.7

64.96

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029514

25269 - 27357

2089