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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_264536_267164_R

Intron Information:

Intron Rank:
9
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
264536 - 267164
Intron Length:
2629

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ACA|GTAAGAATT
5'SS Class:
major
3'SS Sequence:
ATTTTCTTTCAAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AACTAAT
U12 Branch Point Sequence:
TTTTCTTTCAAG
Flanking Amino Acid:
IRGPMLFSITVNFGIFLKIL
Intron Amino Acid Position:
328

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
75.6
0.6
1
78.7
35.4
Major BPS
77.9
0.69
0.8
75.9
25
Major PPT
77.8
0.63
1
76.2
37.5
Minor 5ss
41.6
-0.9
3.2
64.3
40.6
Minor BPS
61
0.2
1.9
72.3
40.7

Associated Gene:

Gene:
GLP2R
Ensembl Gene ID:
ENSAPLG00000003827
Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000003954
251489 - 291388
39900