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Intron Name: Anas_platyrhynchos_platyrhynchos_19_26879_26967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26879 - 26967

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAGAT

U12 Branch Point Sequence:

TCTTAGATGACA

Flanking Amino Acid:

KVTVKTEAGETLTVKDDQIF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

82.1

24.6

Major BPS

66.8

0.42

1.1

64.4

41.8

Major PPT

0.81

0.9

84.5

30.4

Minor 5ss

31.3

-2.1

2.7

33.5

35.5

Minor BPS

45.2

-0.3

2.4

64.34

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029514

25269 - 27357

2089