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Intron Name: Anas_platyrhynchos_platyrhynchos_19_2733493_2789340_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2733493 - 2789340

Intron Length:

55848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTCTCTTACA

Flanking Amino Acid:

ASCAANSINQFFEVPFDSNM

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

0.97

0.6

88.1

21.9

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

61.9

0.37

1.9

80.2

35.2

Associated Gene:

Gene:

COX10

Ensembl Gene ID:

ENSAPLG00000019098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021359

2700136 - 2803753

103618