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Intron Name: Anas_platyrhynchos_platyrhynchos_19_27361_30724_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27361 - 30724

Intron Length:

3364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

AGACCTGCTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTGAT

U12 Branch Point Sequence:

TGGGTCTGAACT

Flanking Amino Acid:

SDNAYQFMLTGPVLPPSQSW

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.7

31.8

Major BPS

0.5

59.3

39.1

Major PPT

50.6

0.01

1.1

45.6

Minor 5ss

-2.3

3.2

38.4

40.8

Minor BPS

59.2

0.37

1.6

73.09

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035172

26675 - 30759

4085