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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3167925_3168309_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3167925 - 3168309

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

GCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TCCCCCCTGACG

Flanking Amino Acid:

TSKMSFDNIRAWLTEIHEYA

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

60.2

39.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

69.3

0.43

0.9

34.8

Minor 5ss

29.4

-2.4

31.4

35.2

Minor BPS

50.6

-0.1

1.8

56.99

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045449

3166453 - 3169137

2685

ENSAPLT00000031533

3166453 - 3169312

2860