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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3168376_3168750_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3168376 - 3168750

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

GTGCCCCCAGCT

Flanking Amino Acid:

DVVIMLLGNKADVSSERAVR

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

77.7

32.4

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

88.5

0.87

0.6

Minor 5ss

29.7

-2.3

3.4

46.1

Minor BPS

44.5

-0.3

2.1

63.95

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031533

3166453 - 3169312

2860