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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3172942_3178241_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3172942 - 3178241

Intron Length:

5300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAATTTGG

5'SS Class:

major

3'SS Sequence:

CCCCTCGCAGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCCTAC

U12 Branch Point Sequence:

CATCCTACAGCT

Flanking Amino Acid:

QERSSGGSERLRPRLCHIKK

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

62.5

44.6

Major BPS

50.1

1.2

50.2

36.4

Major PPT

46.5

-0.2

1.6

50.1

32.7

Minor 5ss

39.2

-1.2

2.8

41.1

45.2

Minor BPS

42.9

-0.4

1.9

60.11

Associated Gene:

Gene:

SLC9A3R1

Ensembl Gene ID:

ENSAPLG00000004539

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004652

3172539 - 3180383

7845