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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3178398_3178960_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3178398 - 3178960

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTGATACCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GTGTGCTGATAC

Flanking Amino Acid:

GLRPQDRIVEVNGVLVEGKQ

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.9

33.8

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

65.9

0.36

0.9

58.1

37.4

Minor 5ss

26.1

-2.7

3.2

33.4

42.6

Minor BPS

42.9

-0.5

2.1

53.35

43.8

Associated Gene:

Gene:

SLC9A3R1

Ensembl Gene ID:

ENSAPLG00000004539

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004652

3172539 - 3180383

7845