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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3179126_3180036_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3179126 - 3180036

Intron Length:

911

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGT|GCCAGCACT

5'SS Class:

weak_major

3'SS Sequence:

CTGCTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

ACCTCTTCACCC

Flanking Amino Acid:

SEAHLAGGSGENSEELRSSS

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.4

0.06

1.4

64.7

40.8

Major BPS

77.5

0.68

79.6

Major PPT

0.47

0.8

34.8

Minor 5ss

29.1

-2.4

3.9

42.9

43.6

Minor BPS

48.2

-0.1

1.8

56.18

42.8

Associated Gene:

Gene:

SLC9A3R1

Ensembl Gene ID:

ENSAPLG00000004539

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004652

3172539 - 3180383

7845