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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3195517_3197050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3195517 - 3197050

Intron Length:

1534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGATAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTGATATTAACT

Flanking Amino Acid:

LVLLMFLGFMSYMTTTFVVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

77.7

33.3

Major BPS

81.9

0.79

0.8

81.9

Major PPT

87.9

0.85

0.6

81.4

30.6

Minor 5ss

38.2

-1.3

3.4

55.2

Minor BPS

65.4

0.56

1.6

81.66

39.6

Associated Gene:

Gene:

TMEM104

Ensembl Gene ID:

ENSAPLG00000004556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004684

3192551 - 3229201

36651