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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3202869_3203593_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3202869 - 3203593

Intron Length:

725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTTTCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

AGCTGATCACTC

Flanking Amino Acid:

AVPVSLMQVTCSAIGNHSCS

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

78.9

0.65

0.7

72.4

32.3

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

36.9

-1

2.1

42.59

38.5

Associated Gene:

Gene:

TMEM104

Ensembl Gene ID:

ENSAPLG00000004556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004684

3192551 - 3229201

36651