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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3218578_3228440_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3218578 - 3228440

Intron Length:

9863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCATGAC

U12 Branch Point Sequence:

TGACCCCAAACC

Flanking Amino Acid:

QIMTSLMRWIAFILMIILAL

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

86.9

30.1

Major BPS

47.8

-0.1

1.3

39.4

40.4

Major PPT

0.72

0.8

73.4

37.1

Minor 5ss

34.7

-1.7

3.1

49.5

46.7

Minor BPS

48.6

-0.1

62.79

41.8

Associated Gene:

Gene:

TMEM104

Ensembl Gene ID:

ENSAPLG00000004556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004684

3192551 - 3229201

36651