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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3237164_3237609_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3237164 - 3237609

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTACGCCCC

5'SS Class:

major

3'SS Sequence:

CGGCGGCGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCCCCCTCACCC

Flanking Amino Acid:

VEDALTSLKMGKLDAFIYDA

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.2

51.8

45.5

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

-0.1

1.1

38.1

39.9

Minor 5ss

37.6

-1.4

3.2

43.4

43.9

Minor BPS

46.2

-0.3

1.9

51.61

45.6

Associated Gene:

Gene:

GRIN2C

Ensembl Gene ID:

ENSAPLG00000004598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047984

3234633 - 3243278

8646

ENSAPLT00000040996

3234823 - 3244935

10113

ENSAPLT00000004733

3234633 - 3241982

7350