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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3238447_3239280_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3238447 - 3239280

Intron Length:

834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCGCA

5'SS Class:

major

3'SS Sequence:

CTGCCCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACCCAT

U12 Branch Point Sequence:

CGTCCCGGGACC

Flanking Amino Acid:

NGTVSPSAFLEPYSPAVWVM

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

62.4

38.2

Major BPS

48.7

-0

1.4

58.4

40.3

Major PPT

78.8

0.65

0.8

72.5

32.1

Minor 5ss

31.7

-2.1

3.3

39.6

45.9

Minor BPS

-0.4

2.2

56.9

41.7

Associated Gene:

Gene:

GRIN2C

Ensembl Gene ID:

ENSAPLG00000004598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047984

3234633 - 3243278

8646

ENSAPLT00000040996

3234823 - 3244935

10113

ENSAPLT00000004733

3234633 - 3241982

7350