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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3239435_3239530_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3239435 - 3239530

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGGGG

5'SS Class:

major

3'SS Sequence:

CTGCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

CTGCCCTGAGCT

Flanking Amino Acid:

RGVWNGMIGEVYYRRADMAI

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

60.1

42.1

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

70.5

0.46

0.8

61.5

34.9

Minor 5ss

27.2

-2.6

3.7

37.3

47.4

Minor BPS

52.9

0.17

1.8

70.53

45.9

Associated Gene:

Gene:

GRIN2C

Ensembl Gene ID:

ENSAPLG00000004598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047984

3234633 - 3243278

8646

ENSAPLT00000040996

3234823 - 3244935

10113

ENSAPLT00000004733

3234633 - 3241982

7350