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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3240541_3241047_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3240541 - 3241047

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGAGCC

5'SS Class:

major

3'SS Sequence:

TCGCCCGGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGATGAT

U12 Branch Point Sequence:

TGGTGATGATGT

Flanking Amino Acid:

SLNQHRLWEMVGKWEHGIIH

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

61.5

38.4

Major BPS

69.5

0.48

1.2

59.7

46.7

Major PPT

53.8

0.09

1.1

49.4

39.2

Minor 5ss

30.4

-2.2

3.5

40.8

Minor BPS

37.1

-0.9

2.3

54.58

46.6

Associated Gene:

Gene:

GRIN2C

Ensembl Gene ID:

ENSAPLG00000004598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047984

3234633 - 3243278

8646

ENSAPLT00000040996

3234823 - 3244935

10113

ENSAPLT00000004733

3234633 - 3241982

7350