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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3241980_3242870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3241980 - 3242870

Intron Length:

891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CACCCCCTGACT

Flanking Amino Acid:

GGSAVVLTPKEPGSAFLQLG

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.6

37.3

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

71.4

0.48

0.8

64.9

30.7

Minor 5ss

31.2

-2.1

3.5

46.7

48.6

Minor BPS

51.8

0.14

1.7

66.57

43.9

Associated Gene:

Gene:

GRIN2C

Ensembl Gene ID:

ENSAPLG00000004598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047984

3234633 - 3243278

8646

ENSAPLT00000040996

3234823 - 3244935

10113