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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3267153_3267842_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3267153 - 3267842

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCC

5'SS Class:

strong_major

3'SS Sequence:

GGTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GGTGGCTGAGCC

Flanking Amino Acid:

LACSLLALPAGFLCLRSARA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.2

36.8

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

80.2

0.68

0.9

73.8

36.9

Minor 5ss

30.3

-2.3

3.5

Minor BPS

42.9

-0.5

2.1

52.92

44.1

Associated Gene:

Gene:

FADS6

Ensembl Gene ID:

ENSAPLG00000005172

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029314

3264406 - 3268885

4480

ENSAPLT00000005347

3264406 - 3270703

6298