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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3296263_3296736_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3296263 - 3296736

Intron Length:

474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACAAAT

U12 Branch Point Sequence:

GTCTCTTCAACA

Flanking Amino Acid:

DSHAGPIWLRGGLILFAIFS

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

72.5

37.3

Major BPS

57.1

0.18

62.9

30.6

Major PPT

0.54

0.9

69.5

35.6

Minor 5ss

31.7

-2.1

3.6

47.8

47.9

Minor BPS

65.9

0.49

1.5

72.25

39.9

Associated Gene:

Gene:

OTOP2

Ensembl Gene ID:

ENSAPLG00000005251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005424

3293825 - 3300738

6914