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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3296849_3298112_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3296849 - 3298112

Intron Length:

1264

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGT|GCAAGCAAT

5'SS Class:

major

3'SS Sequence:

GCCACACATACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACACAT

U12 Branch Point Sequence:

CTGGCCACACAT

Flanking Amino Acid:

LSAIKIIYPIVSITWMGATW

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.6

0.27

1.4

66.5

44.6

Major BPS

57.6

0.19

64.6

32.2

Major PPT

59.4

0.21

50.4

37.4

Minor 5ss

32.7

-2

4.1

49.4

46.6

Minor BPS

38.9

-0.7

2.1

54.03

Associated Gene:

Gene:

OTOP2

Ensembl Gene ID:

ENSAPLG00000005251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031700

3294091 - 3300738

6648