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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3296874_3297434_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3296874 - 3297434

Intron Length:

561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

GTGTCCTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGCAA

U12 Branch Point Sequence:

TTGCAACAAAGC

Flanking Amino Acid:

IVQAIFVVVQTYFLWMSAKD

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

60.4

45.8

Major BPS

53.5

0.09

1.4

39.8

Major PPT

68.9

0.43

1.1

61.8

44.4

Minor 5ss

24.7

-2.9

29.5

43.3

Minor BPS

34.7

-1.1

2.2

46.75

41.8

Associated Gene:

Gene:

OTOP2

Ensembl Gene ID:

ENSAPLG00000005251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005424

3293825 - 3300738

6914